RDP tools have been updated to work with the new fungal 28S rRNA sequence collection.
A new Fungal 28S Aligner and updated Bacterial and Archaeal 16S Aligner.
We optimized the parameters for these secondary-structure based Infernal aligners to provide improved handling for partial sequences.
Updated RDPipeline offers extended processing and analysis tools to process high-throughput sequencing data, including single-strand and paired-end reads.
Most of the RDP tools are now available as open source packages for users to incorporate in their local workflow.